Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 TPRX2P-201ENST00000535362 881 ntBASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 ALOX12P2-203ENST00000570921 1945 ntBASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM7Q9NR12 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.14■□□□□ 0.5
PDLIM7Q9NR12 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM7Q9NR12 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM7Q9NR12 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM7Q9NR12 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM7Q9NR12 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC123567.1-201ENST00000548294 1261 ntBASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC023310.3-201ENST00000557027 670 ntBASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC100756.1-201ENST00000562736 682 ntBASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC138749.3-201ENST00000567691 622 ntBASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 MIR4538-201ENST00000581377 78 ntBASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC061975.2-201ENST00000581722 295 ntBASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 AC116165.1-201ENST00000611806 668 ntBASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM7Q9NR12 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms