Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 AC243960.2-201ENST00000600996 747 ntBASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 MIR8072-201ENST00000614241 80 ntBASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 AC098859.1-201ENST00000502915 1238 ntBASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 AC233724.13-201ENST00000598383 410 ntBASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 LINC00895-201ENST00000629028 1637 ntBASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 AC016396.2-201ENST00000562575 1417 ntBASIC17.98■□□□□ 0.47
UBE2OQ9C0C9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 AL589987.1-201ENST00000453380 819 ntBASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 USP32P1-208ENST00000506594 1164 ntBASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 RNA5SP423-201ENST00000517127 109 ntBASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 MPDU1-223ENST00000582151 728 ntBASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 MIR6727-201ENST00000620702 65 ntBASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.97■□□□□ 0.47
UBE2OQ9C0C9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 AL138688.1-201ENST00000624851 1594 ntBASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 AL033527.5-202ENST00000641632 1098 ntBASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2OQ9C0C9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBE2OQ9C0C9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBE2OQ9C0C9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms