Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF2Q99805 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.27■□□□□ 0.03
TM9SF2Q99805 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.27■□□□□ 0.03
TM9SF2Q99805 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF2Q99805 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TM9SF2Q99805 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 BCAR1-209ENST00000546196 1340 ntBASIC15.26■□□□□ 0.03
TM9SF2Q99805 AC129492.6-201ENST00000611383 1305 ntBASIC15.26■□□□□ 0.03
TM9SF2Q99805 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 RHOQP3-201ENST00000437982 621 ntBASIC15.26■□□□□ 0.03
TM9SF2Q99805 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 PAWRP1-201ENST00000451083 565 ntBASIC15.26■□□□□ 0.03
TM9SF2Q99805 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 OR7E47P-204ENST00000575924 449 ntBASIC15.26■□□□□ 0.03
TM9SF2Q99805 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 AC004877.2-201ENST00000623941 599 ntBASIC15.26■□□□□ 0.03
TM9SF2Q99805 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 AC063926.3-201ENST00000624734 5658 ntBASIC15.26■□□□□ 0.03
TM9SF2Q99805 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TM9SF2Q99805 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF2Q99805 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 AL365203.3-201ENST00000609742 2057 ntBASIC15.25■□□□□ 0.03
TM9SF2Q99805 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 AC004967.1-201ENST00000453589 447 ntBASIC15.25■□□□□ 0.03
TM9SF2Q99805 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 PDPK2P-202ENST00000562415 1191 ntBASIC15.25■□□□□ 0.03
TM9SF2Q99805 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 C20orf181-201ENST00000623918 480 ntBASIC15.25■□□□□ 0.03
TM9SF2Q99805 AC092865.6-201ENST00000642101 219 ntBASIC15.25■□□□□ 0.03
TM9SF2Q99805 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF2Q99805 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF2Q99805 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 EGFEM1P-202ENST00000431685 1563 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms