Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AC105233.2-201ENST00000523697 349 ntBASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AF228730.5-201ENST00000530288 346 ntBASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AC026120.1-201ENST00000611536 926 ntBASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 AC008894.3-201ENST00000624324 3103 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SPCS2P4-201ENST00000436160 681 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SPDYE11-202ENST00000450699 704 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 AC079140.1-201ENST00000508039 487 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SPDYE9P-201ENST00000570642 692 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 AL365330.1-201ENST00000607459 531 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SPDYE10P-202ENST00000612005 668 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SPDYE8P-202ENST00000612377 668 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CDC14C-201ENST00000428251 1719 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG4P5Q96PW8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSPG4P5Q96PW8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CSPG4P5Q96PW8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.83■□□□□ 0.29
CSPG4P5Q96PW8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 ELL2P1-201ENST00000413990 1906 ntBASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 AC142381.1-201ENST00000426099 345 ntBASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 DNAJB3-201ENST00000446806 729 ntBASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 LINC02447-202ENST00000501888 2146 ntBASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.83■□□□□ 0.28
CSPG4P5Q96PW8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms