Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.28■□□□□ 0.36
CASD1Q96PB1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 EEF1DP4-201ENST00000446006 880 ntBASIC17.28■□□□□ 0.36
CASD1Q96PB1 AC022210.1-201ENST00000449856 793 ntBASIC17.28■□□□□ 0.36
CASD1Q96PB1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AL512343.1-201ENST00000605837 169 ntBASIC17.28■□□□□ 0.36
CASD1Q96PB1 AL391069.4-201ENST00000609583 481 ntBASIC17.28■□□□□ 0.36
CASD1Q96PB1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 AL033527.5-201ENST00000641382 801 ntBASIC17.28■□□□□ 0.36
CASD1Q96PB1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 CLK3P2-201ENST00000427566 1453 ntBASIC17.28■□□□□ 0.36
CASD1Q96PB1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.28■□□□□ 0.36
CASD1Q96PB1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASD1Q96PB1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 AC009053.2-201ENST00000563701 2365 ntBASIC17.27■□□□□ 0.36
CASD1Q96PB1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 MIR658-201ENST00000385210 100 ntBASIC17.27■□□□□ 0.36
CASD1Q96PB1 AZGP1P1-201ENST00000411909 902 ntBASIC17.27■□□□□ 0.36
CASD1Q96PB1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 RPS2P32-201ENST00000439199 892 ntBASIC17.27■□□□□ 0.36
CASD1Q96PB1 AC007389.4-201ENST00000454674 793 ntBASIC17.27■□□□□ 0.36
CASD1Q96PB1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 AC092552.1-201ENST00000547243 906 ntBASIC17.27■□□□□ 0.36
CASD1Q96PB1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASD1Q96PB1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.27■□□□□ 0.36
CASD1Q96PB1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.27■□□□□ 0.35
CASD1Q96PB1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASD1Q96PB1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.27■□□□□ 0.35
CASD1Q96PB1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASD1Q96PB1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASD1Q96PB1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CASD1Q96PB1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASD1Q96PB1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASD1Q96PB1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CASD1Q96PB1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASD1Q96PB1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 RN7SL399P-201ENST00000471648 279 ntBASIC17.26■□□□□ 0.35
CASD1Q96PB1 AC104596.2-201ENST00000512793 793 ntBASIC17.26■□□□□ 0.35
CASD1Q96PB1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms