Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 SLC25A39P2-201ENST00000537614 270 ntBASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 AC004449.1-201ENST00000564240 433 ntBASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 AC073389.1-201ENST00000595595 795 ntBASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 AC009093.7-201ENST00000623853 1223 ntBASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTCHD1Q96NR3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 RBPMS2P1-201ENST00000437762 623 ntBASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 LINC00628-201ENST00000628516 1289 ntBASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 FER1L4-210ENST00000615531 5998 ntBASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCHD1Q96NR3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 ALOX12P2-203ENST00000570921 1945 ntBASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 AC084121.4-201ENST00000641598 221 ntBASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 AF228730.8-201ENST00000642140 221 ntBASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCHD1Q96NR3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms