Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 PCDHB19P-201ENST00000570871 2371 ntBASIC15.87■□□□□ 0.13
LINC00615Q96LM1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00615Q96LM1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AL662844.4-201ENST00000606367 2838 ntBASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AL691432.1-201ENST00000596308 1422 ntBASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AP001282.1-201ENST00000531301 1499 ntBASIC15.86■□□□□ 0.13
LINC00615Q96LM1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AL158211.3-201ENST00000607385 239 ntBASIC15.86■□□□□ 0.13
LINC00615Q96LM1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00615Q96LM1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AC004987.2-201ENST00000395959 1148 ntBASIC15.85■□□□□ 0.13
LINC00615Q96LM1 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 HLA-V-204ENST00000476601 1289 ntBASIC15.85■□□□□ 0.13
LINC00615Q96LM1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AC243562.2-201ENST00000561247 970 ntBASIC15.85■□□□□ 0.13
LINC00615Q96LM1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AC099398.1-201ENST00000567919 2776 ntBASIC15.85■□□□□ 0.13
LINC00615Q96LM1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00615Q96LM1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.84■□□□□ 0.13
LINC00615Q96LM1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms