Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 MIR770-201ENST00000390219 98 ntBASIC12.81□□□□□ -0.36
RAX2Q96IS3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.81□□□□□ -0.36
RAX2Q96IS3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 GPS2P2-201ENST00000430745 888 ntBASIC12.81□□□□□ -0.36
RAX2Q96IS3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 AC008267.7-201ENST00000624570 1194 ntBASIC12.81□□□□□ -0.36
RAX2Q96IS3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAX2Q96IS3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAX2Q96IS3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 CNN2P2-201ENST00000443536 909 ntBASIC12.8□□□□□ -0.36
RAX2Q96IS3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 CNN2P3-201ENST00000450201 906 ntBASIC12.8□□□□□ -0.36
RAX2Q96IS3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 SLC25A39P2-201ENST00000537614 270 ntBASIC12.8□□□□□ -0.36
RAX2Q96IS3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.8□□□□□ -0.36
RAX2Q96IS3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 AL136317.3-201ENST00000618497 906 ntBASIC12.8□□□□□ -0.36
RAX2Q96IS3 AP001059.3-201ENST00000619053 235 ntBASIC12.8□□□□□ -0.36
RAX2Q96IS3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 AC006277.1-201ENST00000624348 1610 ntBASIC12.8□□□□□ -0.36
RAX2Q96IS3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RAX2Q96IS3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAX2Q96IS3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms