Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC28Q96AY4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC28Q96AY4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC28Q96AY4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC28Q96AY4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 PDIA3P2-201ENST00000428073 158 ntBASIC16.25■□□□□ 0.19
TTC28Q96AY4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC28Q96AY4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 ALG1L13P-202ENST00000519320 584 ntBASIC16.25■□□□□ 0.19
TTC28Q96AY4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC28Q96AY4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC28Q96AY4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
TTC28Q96AY4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 AC012158.2-201ENST00000536546 354 ntBASIC16.24■□□□□ 0.19
TTC28Q96AY4 AC013355.1-201ENST00000562625 723 ntBASIC16.24■□□□□ 0.19
TTC28Q96AY4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 AC018695.6-201ENST00000614011 534 ntBASIC16.24■□□□□ 0.19
TTC28Q96AY4 AL353770.1-201ENST00000614915 403 ntBASIC16.24■□□□□ 0.19
TTC28Q96AY4 AC138466.4-201ENST00000623965 852 ntBASIC16.24■□□□□ 0.19
TTC28Q96AY4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC28Q96AY4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC28Q96AY4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 CYP4F24P-201ENST00000586049 1580 ntBASIC16.23■□□□□ 0.19
TTC28Q96AY4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 PIN4P1-201ENST00000451079 396 ntBASIC16.23■□□□□ 0.19
TTC28Q96AY4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 AC092171.5-201ENST00000608012 942 ntBASIC16.23■□□□□ 0.19
TTC28Q96AY4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 TARDBPP1-201ENST00000442013 1203 ntBASIC16.23■□□□□ 0.19
TTC28Q96AY4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TTC28Q96AY4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC28Q96AY4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC28Q96AY4 DRD5P1-201ENST00000456605 1438 ntBASIC16.22■□□□□ 0.19
TTC28Q96AY4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TTC28Q96AY4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC28Q96AY4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC28Q96AY4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC28Q96AY4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC28Q96AY4 RPS9P1-201ENST00000419943 583 ntBASIC16.22■□□□□ 0.19
TTC28Q96AY4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TTC28Q96AY4 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms