Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF34Q969K3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
RNF34Q969K3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RNF34Q969K3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF34Q969K3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF34Q969K3 AC254562.1-201ENST00000417586 456 ntBASIC17.14■□□□□ 0.33
RNF34Q969K3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 CNN2P11-201ENST00000429351 262 ntBASIC17.14■□□□□ 0.33
RNF34Q969K3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF34Q969K3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF34Q969K3 DNAJB3-202ENST00000449667 1266 ntBASIC17.14■□□□□ 0.33
RNF34Q969K3 AP000344.2-201ENST00000512987 629 ntBASIC17.14■□□□□ 0.33
RNF34Q969K3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF34Q969K3 AL138918.1-201ENST00000568306 659 ntBASIC17.14■□□□□ 0.33
RNF34Q969K3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF34Q969K3 AC022145.2-201ENST00000598203 171 ntBASIC17.14■□□□□ 0.33
RNF34Q969K3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF34Q969K3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
RNF34Q969K3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF34Q969K3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF34Q969K3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF34Q969K3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF34Q969K3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF34Q969K3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RNF34Q969K3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF34Q969K3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF34Q969K3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF34Q969K3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RNF34Q969K3 AC004461.1-201ENST00000412461 403 ntBASIC17.13■□□□□ 0.33
RNF34Q969K3 SPCS2P4-201ENST00000436160 681 ntBASIC17.13■□□□□ 0.33
RNF34Q969K3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.13■□□□□ 0.33
RNF34Q969K3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF34Q969K3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF34Q969K3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 AC008267.7-201ENST00000624570 1194 ntBASIC17.13■□□□□ 0.33
RNF34Q969K3 AL513210.1-201ENST00000629608 234 ntBASIC17.13■□□□□ 0.33
RNF34Q969K3 AC126755.1-201ENST00000525846 6405 ntBASIC17.13■□□□□ 0.33
RNF34Q969K3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF34Q969K3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF34Q969K3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF34Q969K3 AC005622.1-201ENST00000636801 1703 ntBASIC17.13■□□□□ 0.33
RNF34Q969K3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 AC073439.1-201ENST00000624121 1774 ntBASIC17.12■□□□□ 0.33
RNF34Q969K3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF34Q969K3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF34Q969K3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF34Q969K3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF34Q969K3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms