Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.09■□□□□ 0.01
HPS1Q92902 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 AL022342.1-201ENST00000400363 863 ntBASIC15.09■□□□□ 0.01
HPS1Q92902 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.09■□□□□ 0.01
HPS1Q92902 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.09■□□□□ 0.01
HPS1Q92902 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.09■□□□□ 0.01
HPS1Q92902 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.09■□□□□ 0.01
HPS1Q92902 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.09■□□□□ 0.01
HPS1Q92902 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 AC010326.4-201ENST00000604665 891 ntBASIC15.09■□□□□ 0.01
HPS1Q92902 AL591684.3-201ENST00000605187 298 ntBASIC15.09■□□□□ 0.01
HPS1Q92902 AC114341.1-201ENST00000618070 349 ntBASIC15.09■□□□□ 0.01
HPS1Q92902 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.09■□□□□ 0.01
HPS1Q92902 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.09■□□□□ 0.01
HPS1Q92902 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HPS1Q92902 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HPS1Q92902 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.09■□□□□ 0.01
HPS1Q92902 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HPS1Q92902 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HPS1Q92902 AC016396.2-201ENST00000562575 1417 ntBASIC15.09■□□□□ 0.01
HPS1Q92902 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HPS1Q92902 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HPS1Q92902 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HPS1Q92902 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HPS1Q92902 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
HPS1Q92902 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
HPS1Q92902 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.08■□□□□ 0.01
HPS1Q92902 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HPS1Q92902 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
HPS1Q92902 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
HPS1Q92902 OR2I1P-210ENST00000642037 4691 ntBASIC15.08■□□□□ 0
HPS1Q92902 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HPS1Q92902 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HPS1Q92902 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 AKR1C7P-201ENST00000305623 895 ntBASIC15.08■□□□□ 0
HPS1Q92902 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.08■□□□□ 0
HPS1Q92902 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.08■□□□□ 0
HPS1Q92902 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.08■□□□□ 0
HPS1Q92902 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HPS1Q92902 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.08■□□□□ 0
HPS1Q92902 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.08■□□□□ 0
HPS1Q92902 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.08■□□□□ 0
HPS1Q92902 MIR5100-201ENST00000579544 119 ntBASIC15.08■□□□□ 0
HPS1Q92902 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HPS1Q92902 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.08■□□□□ 0
HPS1Q92902 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.08■□□□□ 0
HPS1Q92902 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.08■□□□□ 0
HPS1Q92902 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.08■□□□□ 0
HPS1Q92902 AC007686.3-201ENST00000619017 3487 ntBASIC15.08■□□□□ 0
HPS1Q92902 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HPS1Q92902 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.07■□□□□ 0
HPS1Q92902 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 AC100803.2-201ENST00000562459 1963 ntBASIC15.07■□□□□ 0
HPS1Q92902 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.07■□□□□ 0
HPS1Q92902 AL137784.3-201ENST00000623858 2288 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms