Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.62■□□□□ 0.57
ERCC4Q92889 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC4Q92889 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.62■□□□□ 0.57
ERCC4Q92889 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 KRT18P56-201ENST00000507275 550 ntBASIC18.62■□□□□ 0.57
ERCC4Q92889 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.62■□□□□ 0.57
ERCC4Q92889 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC4Q92889 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ERCC4Q92889 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
ERCC4Q92889 AP002414.3-201ENST00000589352 1468 ntBASIC18.62■□□□□ 0.57
ERCC4Q92889 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC4Q92889 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC4Q92889 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC4Q92889 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC4Q92889 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ERCC4Q92889 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC4Q92889 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.61■□□□□ 0.57
ERCC4Q92889 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC4Q92889 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC4Q92889 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC4Q92889 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 OR7E14P-202ENST00000530490 1290 ntBASIC18.61■□□□□ 0.57
ERCC4Q92889 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.61■□□□□ 0.57
ERCC4Q92889 AC006557.2-201ENST00000592985 1240 ntBASIC18.61■□□□□ 0.57
ERCC4Q92889 AC010654.1-201ENST00000615722 808 ntBASIC18.61■□□□□ 0.57
ERCC4Q92889 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.61■□□□□ 0.57
ERCC4Q92889 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERCC4Q92889 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 AC073347.1-201ENST00000421633 2643 ntBASIC18.61■□□□□ 0.57
ERCC4Q92889 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC4Q92889 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC4Q92889 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC4Q92889 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.61■□□□□ 0.57
ERCC4Q92889 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERCC4Q92889 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 CDC14C-201ENST00000428251 1719 ntBASIC18.6■□□□□ 0.57
ERCC4Q92889 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC4Q92889 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC4Q92889 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC4Q92889 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC4Q92889 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC4Q92889 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.6■□□□□ 0.57
ERCC4Q92889 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC4Q92889 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC4Q92889 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.6■□□□□ 0.57
ERCC4Q92889 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC4Q92889 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC4Q92889 LINC02447-202ENST00000501888 2146 ntBASIC18.6■□□□□ 0.57
ERCC4Q92889 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms