Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.5■□□□□ 0.07
TM9SF4Q92544 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 AC091167.2-201ENST00000579581 588 ntBASIC15.5■□□□□ 0.07
TM9SF4Q92544 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 AC239800.4-201ENST00000603712 296 ntBASIC15.5■□□□□ 0.07
TM9SF4Q92544 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 WASH6P-202ENST00000359512 1437 ntBASIC15.5■□□□□ 0.07
TM9SF4Q92544 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 MIR943-201ENST00000401286 94 ntBASIC15.49■□□□□ 0.07
TM9SF4Q92544 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.49■□□□□ 0.07
TM9SF4Q92544 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 SPCS2P4-201ENST00000436160 681 ntBASIC15.49■□□□□ 0.07
TM9SF4Q92544 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 AC051619.7-201ENST00000568314 623 ntBASIC15.49■□□□□ 0.07
TM9SF4Q92544 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 MIR3909-201ENST00000579518 119 ntBASIC15.49■□□□□ 0.07
TM9SF4Q92544 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF4Q92544 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TM9SF4Q92544 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 AC055876.3-201ENST00000431496 288 ntBASIC15.48■□□□□ 0.07
TM9SF4Q92544 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF4Q92544 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 DUX4L27-201ENST00000554796 1261 ntBASIC15.48■□□□□ 0.07
TM9SF4Q92544 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TM9SF4Q92544 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms