Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LINC01225-203ENST00000563550 1244 ntBASIC17.42■□□□□ 0.38
SHC3Q92529 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.42■□□□□ 0.38
SHC3Q92529 MTDHP5-201ENST00000598980 586 ntBASIC17.42■□□□□ 0.38
SHC3Q92529 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.42■□□□□ 0.38
SHC3Q92529 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC3Q92529 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.42■□□□□ 0.38
SHC3Q92529 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.42■□□□□ 0.38
SHC3Q92529 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC3Q92529 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC3Q92529 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.42■□□□□ 0.38
SHC3Q92529 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC3Q92529 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC3Q92529 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SHC3Q92529 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC3Q92529 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC3Q92529 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
SHC3Q92529 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.42■□□□□ 0.38
SHC3Q92529 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SHC3Q92529 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.42■□□□□ 0.38
SHC3Q92529 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.42■□□□□ 0.38
SHC3Q92529 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC3Q92529 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SHC3Q92529 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHC3Q92529 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC3Q92529 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC3Q92529 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 HAUS4P1-201ENST00000406739 1145 ntBASIC17.41■□□□□ 0.38
SHC3Q92529 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 HTR5BP-201ENST00000430851 1154 ntBASIC17.41■□□□□ 0.38
SHC3Q92529 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.41■□□□□ 0.38
SHC3Q92529 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.41■□□□□ 0.38
SHC3Q92529 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.41■□□□□ 0.38
SHC3Q92529 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.41■□□□□ 0.38
SHC3Q92529 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.41■□□□□ 0.38
SHC3Q92529 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.41■□□□□ 0.38
SHC3Q92529 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC3Q92529 AC026120.1-201ENST00000611536 926 ntBASIC17.41■□□□□ 0.38
SHC3Q92529 SPTSSB-204ENST00000617024 1292 ntBASIC17.41■□□□□ 0.38
SHC3Q92529 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.41■□□□□ 0.38
SHC3Q92529 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC3Q92529 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC3Q92529 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SHC3Q92529 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SHC3Q92529 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC3Q92529 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SHC3Q92529 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC3Q92529 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SHC3Q92529 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 MIR346-201ENST00000362234 95 ntBASIC17.4■□□□□ 0.38
SHC3Q92529 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC3Q92529 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 SPCS2P4-201ENST00000436160 681 ntBASIC17.4■□□□□ 0.38
SHC3Q92529 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.4■□□□□ 0.38
SHC3Q92529 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.4■□□□□ 0.38
SHC3Q92529 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.4■□□□□ 0.38
SHC3Q92529 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.4■□□□□ 0.38
SHC3Q92529 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
SHC3Q92529 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC3Q92529 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC3Q92529 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC3Q92529 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC3Q92529 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.4■□□□□ 0.38
SHC3Q92529 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC3Q92529 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms