Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.39■□□□□ 0.37
DDX1Q92499 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DDX1Q92499 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DDX1Q92499 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX1Q92499 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
DDX1Q92499 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX1Q92499 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX1Q92499 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DDX1Q92499 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX1Q92499 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX1Q92499 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DDX1Q92499 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.38■□□□□ 0.37
DDX1Q92499 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX1Q92499 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DDX1Q92499 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX1Q92499 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DDX1Q92499 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX1Q92499 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX1Q92499 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
DDX1Q92499 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
DDX1Q92499 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX1Q92499 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 AL355306.1-201ENST00000415580 579 ntBASIC17.38■□□□□ 0.37
DDX1Q92499 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.38■□□□□ 0.37
DDX1Q92499 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.38■□□□□ 0.37
DDX1Q92499 PRYP6-201ENST00000514804 343 ntBASIC17.38■□□□□ 0.37
DDX1Q92499 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
DDX1Q92499 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.38■□□□□ 0.37
DDX1Q92499 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX1Q92499 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX1Q92499 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX1Q92499 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
DDX1Q92499 AC004835.2-201ENST00000603762 682 ntBASIC17.38■□□□□ 0.37
DDX1Q92499 AJ011932.1-201ENST00000621707 465 ntBASIC17.38■□□□□ 0.37
DDX1Q92499 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX1Q92499 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
DDX1Q92499 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DDX1Q92499 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX1Q92499 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
DDX1Q92499 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX1Q92499 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 CICP6-201ENST00000457191 2729 ntBASIC17.37■□□□□ 0.37
DDX1Q92499 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
DDX1Q92499 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX1Q92499 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX1Q92499 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.37■□□□□ 0.37
DDX1Q92499 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.37■□□□□ 0.37
DDX1Q92499 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
DDX1Q92499 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
DDX1Q92499 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms