Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 AC132872.4-202ENST00000622924 2756 ntBASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 AC068137.2-201ENST00000605408 478 ntBASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.47■□□□□ 0.07
SIMC1Q8NDZ2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 PCGF3-213ENST00000620529 1899 ntBASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 AC024909.3-201ENST00000611513 2257 ntBASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 AC092474.2-201ENST00000424288 719 ntBASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.46■□□□□ 0.07
SIMC1Q8NDZ2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.46■□□□□ 0.06
SIMC1Q8NDZ2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms