Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 AC100757.3-201ENST00000622361 1406 ntBASIC17.76■□□□□ 0.43
VPS52Q8N1B4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 AL590560.3-201ENST00000623350 461 ntBASIC17.76■□□□□ 0.43
VPS52Q8N1B4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 UBALD1-205ENST00000590891 2641 ntBASIC17.75■□□□□ 0.43
VPS52Q8N1B4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.75■□□□□ 0.43
VPS52Q8N1B4 SERBP1P5-201ENST00000510079 1181 ntBASIC17.75■□□□□ 0.43
VPS52Q8N1B4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 AC073389.1-201ENST00000595595 795 ntBASIC17.75■□□□□ 0.43
VPS52Q8N1B4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS52Q8N1B4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 MRPS18AP1-201ENST00000414458 589 ntBASIC17.74■□□□□ 0.43
VPS52Q8N1B4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 CRB3P1-201ENST00000449338 276 ntBASIC17.74■□□□□ 0.43
VPS52Q8N1B4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms