Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.65■□□□□ 0.26
CHPFQ8IZ52 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHPFQ8IZ52 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 AC244107.1-201ENST00000442033 332 ntBASIC16.64■□□□□ 0.25
CHPFQ8IZ52 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 AC020765.3-201ENST00000613051 740 ntBASIC16.64■□□□□ 0.25
CHPFQ8IZ52 TEX28P1-201ENST00000613479 1221 ntBASIC16.64■□□□□ 0.25
CHPFQ8IZ52 TEX28P2-201ENST00000617764 1221 ntBASIC16.64■□□□□ 0.25
CHPFQ8IZ52 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 AGGF1P2-201ENST00000426656 2106 ntBASIC16.64■□□□□ 0.25
CHPFQ8IZ52 AL512652.2-201ENST00000625156 1716 ntBASIC16.64■□□□□ 0.25
CHPFQ8IZ52 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHPFQ8IZ52 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 RPL37AP1-201ENST00000412502 279 ntBASIC16.63■□□□□ 0.25
CHPFQ8IZ52 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 AC060834.1-201ENST00000443027 2032 ntBASIC16.63■□□□□ 0.25
CHPFQ8IZ52 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 AC087499.5-201ENST00000452760 1342 ntBASIC16.63■□□□□ 0.25
CHPFQ8IZ52 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHPFQ8IZ52 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms