Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC025580.3-201ENST00000617932 1424 ntBASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL3Q8IVW4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.83■□□□□ 0.29
CDKL3Q8IVW4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKL3Q8IVW4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKL3Q8IVW4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKL3Q8IVW4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKL3Q8IVW4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 CDC14C-201ENST00000428251 1719 ntBASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 AC093724.1-201ENST00000448659 1027 ntBASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 KRT19P2-202ENST00000557173 1012 ntBASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 AC018845.2-201ENST00000568326 409 ntBASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 AC016027.1-202ENST00000607927 1699 ntBASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKL3Q8IVW4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 LINC02447-202ENST00000501888 2146 ntBASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 AC007967.2-201ENST00000432613 625 ntBASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 AC010491.1-201ENST00000563101 2797 ntBASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 AC069224.1-201ENST00000566372 1715 ntBASIC16.82■□□□□ 0.28
CDKL3Q8IVW4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms