Protein–RNA interactions for Protein: Q8IVH2

FOXP4, Forkhead box protein P4, humanhuman

Predicted RBP Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4Q8IVH2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 AC026979.3-201ENST00000607315 403 ntBASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 AC004233.3-201ENST00000607794 1269 ntBASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 AL662799.1-202ENST00000614205 422 ntBASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP4Q8IVH2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 LINC01144-201ENST00000626198 1710 ntBASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 SPDYE17-201ENST00000412399 783 ntBASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 AC005034.1-201ENST00000426657 489 ntBASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 AL035252.4-201ENST00000624174 288 ntBASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 AL358472.5-202ENST00000641448 1267 ntBASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FOXP4Q8IVH2 BTBD7P1-201ENST00000447253 1453 ntBASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 PCGF3-213ENST00000620529 1899 ntBASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 AP005018.1-201ENST00000525475 301 ntBASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 AC012645.4-201ENST00000610691 1061 ntBASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXP4Q8IVH2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms