Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.36■□□□□ 0.21
LDB1Q86U70 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.36■□□□□ 0.21
LDB1Q86U70 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LDB1Q86U70 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.36■□□□□ 0.21
LDB1Q86U70 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.36■□□□□ 0.21
LDB1Q86U70 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.36■□□□□ 0.21
LDB1Q86U70 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LDB1Q86U70 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB1Q86U70 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 AP003680.1-201ENST00000598970 3660 ntBASIC16.36■□□□□ 0.21
LDB1Q86U70 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB1Q86U70 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.36■□□□□ 0.21
LDB1Q86U70 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB1Q86U70 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.36■□□□□ 0.21
LDB1Q86U70 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LDB1Q86U70 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB1Q86U70 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
LDB1Q86U70 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.36■□□□□ 0.21
LDB1Q86U70 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LDB1Q86U70 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LDB1Q86U70 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB1Q86U70 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB1Q86U70 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB1Q86U70 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB1Q86U70 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB1Q86U70 KRT18P34-201ENST00000488218 1270 ntBASIC16.35■□□□□ 0.21
LDB1Q86U70 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB1Q86U70 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 AL603832.2-201ENST00000566195 2125 ntBASIC16.35■□□□□ 0.21
LDB1Q86U70 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 AL671883.3-201ENST00000603274 991 ntBASIC16.35■□□□□ 0.21
LDB1Q86U70 AC099522.2-201ENST00000607001 744 ntBASIC16.35■□□□□ 0.21
LDB1Q86U70 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB1Q86U70 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB1Q86U70 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LDB1Q86U70 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
LDB1Q86U70 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LDB1Q86U70 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 HYMAI-201ENST00000635591 3347 ntBASIC16.35■□□□□ 0.21
LDB1Q86U70 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
LDB1Q86U70 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB1Q86U70 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB1Q86U70 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.35■□□□□ 0.21
LDB1Q86U70 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LDB1Q86U70 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB1Q86U70 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LDB1Q86U70 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB1Q86U70 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.34■□□□□ 0.21
LDB1Q86U70 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB1Q86U70 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB1Q86U70 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB1Q86U70 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB1Q86U70 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB1Q86U70 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB1Q86U70 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LDB1Q86U70 AL592424.1-201ENST00000563624 1536 ntBASIC16.34■□□□□ 0.21
LDB1Q86U70 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LDB1Q86U70 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LDB1Q86U70 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDB1Q86U70 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.33■□□□□ 0.21
LDB1Q86U70 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms