Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 AC073592.4-201ENST00000623827 446 ntBASIC15.2■□□□□ 0.02
TUBA1AQ71U36 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 AC097637.2-201ENST00000624096 1997 ntBASIC15.2■□□□□ 0.02
TUBA1AQ71U36 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 AC013268.4-201ENST00000637413 2228 ntBASIC15.19■□□□□ 0.02
TUBA1AQ71U36 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 FDX1P1-201ENST00000449115 551 ntBASIC15.19■□□□□ 0.02
TUBA1AQ71U36 AC018712.1-201ENST00000455767 687 ntBASIC15.19■□□□□ 0.02
TUBA1AQ71U36 HLA-J-202ENST00000469281 1241 ntBASIC15.19■□□□□ 0.02
TUBA1AQ71U36 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 AL773604.1-201ENST00000617417 272 ntBASIC15.19■□□□□ 0.02
TUBA1AQ71U36 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.19■□□□□ 0.02
TUBA1AQ71U36 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 AL135999.2-201ENST00000622438 1686 ntBASIC15.19■□□□□ 0.02
TUBA1AQ71U36 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TUBA1AQ71U36 TUBB8P12-201ENST00000308911 1335 ntBASIC15.18■□□□□ 0.02
TUBA1AQ71U36 TUBB7P-202ENST00000428444 1305 ntBASIC15.18■□□□□ 0.02
TUBA1AQ71U36 TUBB8P7-204ENST00000567960 1332 ntBASIC15.18■□□□□ 0.02
TUBA1AQ71U36 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 AL031284.1-201ENST00000419297 478 ntBASIC15.18■□□□□ 0.02
TUBA1AQ71U36 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 OR7E14P-202ENST00000530490 1290 ntBASIC15.18■□□□□ 0.02
TUBA1AQ71U36 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms