Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC092919.2-201ENST00000623631 1645 ntBASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 AC074386.1-202ENST00000463561 864 ntBASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 POU5F1P6-201ENST00000466990 990 ntBASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NHLRC1Q6VVB1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms