Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 RBM17P1-201ENST00000453646 1190 ntBASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 LINC00895-201ENST00000629028 1637 ntBASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 CICP14-201ENST00000629111 2732 ntBASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 NAPSB-206ENST00000562112 1266 ntBASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KCNIP4Q6PIL6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms