Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 AC046158.3-201ENST00000624947 2558 ntBASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 AC074386.1-202ENST00000463561 864 ntBASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF549Q6P9A3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 AC068137.2-201ENST00000605408 478 ntBASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 AC027601.4-201ENST00000611259 610 ntBASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF549Q6P9A3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 MED15P5-201ENST00000423150 992 ntBASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 KRT18P3-201ENST00000451602 1288 ntBASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 KRT18P34-201ENST00000488218 1270 ntBASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 FAM197Y3-203ENST00000618346 717 ntBASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF549Q6P9A3 PAUPAR-201ENST00000630360 2965 ntBASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms