Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H3F3CQ6NXT2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AL353705.2-201ENST00000428243 662 ntBASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 MIR4745-201ENST00000577608 62 ntBASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AC073592.8-201ENST00000624126 511 ntBASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3CQ6NXT2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AL589702.1-201ENST00000641229 1509 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AC241585.1-201ENST00000433527 519 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 HLA-V-204ENST00000476601 1289 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 RNA5SP410-201ENST00000516285 106 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 IGHV3-42-201ENST00000520410 361 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AC024267.1-201ENST00000582320 895 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AL390754.1-201ENST00000619088 582 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 AL590560.3-201ENST00000623350 461 ntBASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms