Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 AC067930.6-201ENST00000623257 4947 ntBASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 AC103564.2-201ENST00000432853 1299 ntBASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 SCARNA2-201ENST00000458748 420 ntBASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 AC073648.2-201ENST00000510116 352 ntBASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PPP4R4Q6NUP7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 FAM197Y8-203ENST00000450145 560 ntBASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 AC073592.5-201ENST00000624854 528 ntBASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 KRT8P10-201ENST00000450021 1447 ntBASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.76■□□□□ 0.11
PPP4R4Q6NUP7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 KLF4P1-201ENST00000412782 1185 ntBASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 RBM17P3-201ENST00000417687 1192 ntBASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.75■□□□□ 0.11
PPP4R4Q6NUP7 AF186996.4-201ENST00000467186 377 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms