Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 AC091046.1-201ENST00000331871 207 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 BRWD1P1-201ENST00000401091 371 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 NKAIN1P1-201ENST00000435754 582 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 AC105129.2-201ENST00000559536 390 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 AC120045.2-201ENST00000567334 178 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 GPAA1P2-201ENST00000417923 928 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 CALR4P-201ENST00000431943 946 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 AP002490.2-201ENST00000524791 560 ntBASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13DQ5THJ4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 AC018892.3-201ENST00000623986 2499 ntBASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 AC078819.1-201ENST00000547454 765 ntBASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 AC012085.1-201ENST00000548270 765 ntBASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 AC105020.1-201ENST00000435356 2205 ntBASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
VPS13DQ5THJ4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 PCDHB18P-201ENST00000524813 2368 ntBASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 RPS2P36-201ENST00000456516 831 ntBASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AC093813.1-201ENST00000605066 256 ntBASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AC005915.1-201ENST00000624912 2018 ntBASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AL121723.1-201ENST00000445194 1519 ntBASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 AP001063.1-201ENST00000568332 529 ntBASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13DQ5THJ4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms