Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00242Q5T6M2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 NUS1P2-201ENST00000417358 873 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 FAM86EP-206ENST00000510506 987 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AP000867.3-201ENST00000524675 377 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AC087641.1-201ENST00000557561 1021 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AC099336.1-202ENST00000602961 463 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AL591684.3-201ENST00000605187 298 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AP001269.4-201ENST00000609611 512 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AC116407.4-201ENST00000623319 1061 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 AC092919.2-201ENST00000623631 1645 ntBASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00242Q5T6M2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms