Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 AC064862.7-201ENST00000604520 867 ntBASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 AL591684.3-201ENST00000605187 298 ntBASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 AP005117.1-201ENST00000584346 1413 ntBASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.34■□□□□ 0.21
SH2D4BQ5SQS7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 AL512652.2-201ENST00000625156 1716 ntBASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SH2D4BQ5SQS7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 AP001269.4-201ENST00000609611 512 ntBASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 GGT4P-201ENST00000623672 1708 ntBASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 AL031731.1-201ENST00000642131 2094 ntBASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH2D4BQ5SQS7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 PRYP5-201ENST00000451909 266 ntBASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 AC006449.6-201ENST00000612330 2296 ntBASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH2D4BQ5SQS7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 AL603832.2-201ENST00000566195 2125 ntBASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms