Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CROCCP1-201ENST00000426910 5675 ntBASIC18.73■□□□□ 0.59
USH1GQ495M9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
USH1GQ495M9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.73■□□□□ 0.59
USH1GQ495M9 TSSK5P-201ENST00000423978 907 ntBASIC18.73■□□□□ 0.59
USH1GQ495M9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 HLA-V-204ENST00000476601 1289 ntBASIC18.73■□□□□ 0.59
USH1GQ495M9 AC004890.2-204ENST00000481968 304 ntBASIC18.73■□□□□ 0.59
USH1GQ495M9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.73■□□□□ 0.59
USH1GQ495M9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.73■□□□□ 0.59
USH1GQ495M9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.73■□□□□ 0.59
USH1GQ495M9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.73■□□□□ 0.59
USH1GQ495M9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.73■□□□□ 0.59
USH1GQ495M9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.73■□□□□ 0.59
USH1GQ495M9 TEX28P1-201ENST00000613479 1221 ntBASIC18.73■□□□□ 0.59
USH1GQ495M9 TEX28P2-201ENST00000617764 1221 ntBASIC18.73■□□□□ 0.59
USH1GQ495M9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 U82695.1-201ENST00000635752 1889 ntBASIC18.73■□□□□ 0.59
USH1GQ495M9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
USH1GQ495M9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USH1GQ495M9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.72■□□□□ 0.59
USH1GQ495M9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 NKILA-202ENST00000614771 2598 ntBASIC18.72■□□□□ 0.59
USH1GQ495M9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.72■□□□□ 0.59
USH1GQ495M9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
USH1GQ495M9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.72■□□□□ 0.59
USH1GQ495M9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.72■□□□□ 0.59
USH1GQ495M9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
USH1GQ495M9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 RN7SL204P-201ENST00000582831 262 ntBASIC18.72■□□□□ 0.59
USH1GQ495M9 AC138761.1-201ENST00000584393 385 ntBASIC18.72■□□□□ 0.59
USH1GQ495M9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
USH1GQ495M9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
USH1GQ495M9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USH1GQ495M9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
USH1GQ495M9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.71■□□□□ 0.59
USH1GQ495M9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.71■□□□□ 0.59
USH1GQ495M9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USH1GQ495M9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
USH1GQ495M9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.71■□□□□ 0.59
USH1GQ495M9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.71■□□□□ 0.59
USH1GQ495M9 MRPS18AP1-201ENST00000414458 589 ntBASIC18.71■□□□□ 0.59
USH1GQ495M9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.71■□□□□ 0.59
USH1GQ495M9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 AC002472.2-201ENST00000442739 958 ntBASIC18.71■□□□□ 0.59
USH1GQ495M9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.71■□□□□ 0.59
USH1GQ495M9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USH1GQ495M9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.71■□□□□ 0.59
USH1GQ495M9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.71■□□□□ 0.59
USH1GQ495M9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.71■□□□□ 0.59
USH1GQ495M9 AL079307.3-201ENST00000556114 283 ntBASIC18.71■□□□□ 0.59
USH1GQ495M9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.71■□□□□ 0.59
USH1GQ495M9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms