Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 SPDYE21P-201ENST00000413323 827 ntBASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 AC246785.2-201ENST00000432512 513 ntBASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 AC010654.1-201ENST00000615722 808 ntBASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ANKRD55Q3KP44 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
ANKRD55Q3KP44 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AL590787.1-201ENST00000568856 1315 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 TP73-AS1-210ENST00000637775 1455 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 VENTXP7-201ENST00000475503 772 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 MPDU1-223ENST00000582151 728 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 CICP24-201ENST00000605464 2705 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms