Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 DOC2GP-202ENST00000514950 1163 ntBASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 MIR4492-201ENST00000581627 80 ntBASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 AC084346.2-201ENST00000607097 949 ntBASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 SPTSSB-204ENST00000617024 1292 ntBASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 PCDHA1-201ENST00000378133 2726 ntBASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 MIR4259-201ENST00000584466 101 ntBASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 AL033527.4-201ENST00000641026 673 ntBASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 HCG11-201ENST00000411553 5696 ntBASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.44■□□□□ 0.38
CTC1Q2NKJ3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 SLC7A15P-201ENST00000424028 1363 ntBASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 RN7SL837P-201ENST00000463010 287 ntBASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 AC119751.2-201ENST00000504529 210 ntBASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 AL512343.1-201ENST00000605837 169 ntBASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 AL603756.1-201ENST00000606511 2163 ntBASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CTC1Q2NKJ3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms