Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 AC008687.7-202ENST00000637404 953 ntBASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 LYSMD4-203ENST00000378904 2122 ntBASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 AC091046.1-201ENST00000331871 207 ntBASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 MIR33B-201ENST00000385104 96 ntBASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 RPL17P11-201ENST00000417593 544 ntBASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 AL359711.2-201ENST00000563105 872 ntBASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 AC020914.3-201ENST00000594712 304 ntBASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 AC244669.2-201ENST00000612320 853 ntBASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RSPO4Q2I0M5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 KRT8P49-201ENST00000604166 1432 ntBASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.72■□□□□ 0.11
RSPO4Q2I0M5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms