Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.63□□□□□ -0.55
RPL39P62891 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 AC073508.3-201ENST00000619697 1419 ntBASIC11.63□□□□□ -0.55
RPL39P62891 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 INTS4P1-201ENST00000438455 1935 ntBASIC11.63□□□□□ -0.55
RPL39P62891 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
RPL39P62891 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 KRT18P57-201ENST00000443599 1254 ntBASIC11.63□□□□□ -0.55
RPL39P62891 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 AC006011.2-201ENST00000621313 1158 ntBASIC11.63□□□□□ -0.55
RPL39P62891 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 SSR4P1-203ENST00000599569 2260 ntBASIC11.63□□□□□ -0.55
RPL39P62891 OR2I1P-210ENST00000642037 4691 ntBASIC11.63□□□□□ -0.55
RPL39P62891 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.63□□□□□ -0.55
RPL39P62891 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.63□□□□□ -0.55
RPL39P62891 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.63□□□□□ -0.55
RPL39P62891 LINC01144-201ENST00000626198 1710 ntBASIC11.63□□□□□ -0.55
RPL39P62891 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.63□□□□□ -0.55
RPL39P62891 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
RPL39P62891 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RPL39P62891 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 AL590787.1-201ENST00000568856 1315 ntBASIC11.62□□□□□ -0.55
RPL39P62891 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.62□□□□□ -0.55
RPL39P62891 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 AL009178.2-201ENST00000597278 2719 ntBASIC11.62□□□□□ -0.55
RPL39P62891 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.62□□□□□ -0.55
RPL39P62891 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 AC096582.2-201ENST00000510860 516 ntBASIC11.62□□□□□ -0.55
RPL39P62891 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms