Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 MIR648-201ENST00000385046 94 ntBASIC14.74□□□□□ -0.05
VBP1P61758 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.74□□□□□ -0.05
VBP1P61758 AP003071.4-201ENST00000562276 1284 ntBASIC14.74□□□□□ -0.05
VBP1P61758 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.74□□□□□ -0.05
VBP1P61758 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
VBP1P61758 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.74□□□□□ -0.05
VBP1P61758 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.74□□□□□ -0.05
VBP1P61758 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VBP1P61758 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 AC005912.2-201ENST00000619492 2400 ntBASIC14.74□□□□□ -0.05
VBP1P61758 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VBP1P61758 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.74□□□□□ -0.05
VBP1P61758 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VBP1P61758 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.74□□□□□ -0.05
VBP1P61758 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VBP1P61758 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.73□□□□□ -0.05
VBP1P61758 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VBP1P61758 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VBP1P61758 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.73□□□□□ -0.05
VBP1P61758 RASA4DP-201ENST00000460726 1199 ntBASIC14.73□□□□□ -0.05
VBP1P61758 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.73□□□□□ -0.05
VBP1P61758 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VBP1P61758 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.73□□□□□ -0.05
VBP1P61758 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
VBP1P61758 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.73□□□□□ -0.05
VBP1P61758 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
VBP1P61758 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 AC132938.5-201ENST00000624980 1813 ntBASIC14.73□□□□□ -0.05
VBP1P61758 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.73□□□□□ -0.05
VBP1P61758 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VBP1P61758 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 AL122018.1-201ENST00000446607 2310 ntBASIC14.72□□□□□ -0.05
VBP1P61758 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.72□□□□□ -0.05
VBP1P61758 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
VBP1P61758 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
VBP1P61758 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.72□□□□□ -0.05
VBP1P61758 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 AC003669.1-201ENST00000334569 611 ntBASIC14.72□□□□□ -0.05
VBP1P61758 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms