Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.03■□□□□ -0
CDC42P60953 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.03■□□□□ -0
CDC42P60953 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDC42P60953 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDC42P60953 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDC42P60953 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDC42P60953 NCF1C-201ENST00000438382 1427 ntBASIC15.03■□□□□ -0
CDC42P60953 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDC42P60953 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CDC42P60953 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.03■□□□□ -0
CDC42P60953 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CDC42P60953 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.03■□□□□ -0
CDC42P60953 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.03■□□□□ -0
CDC42P60953 AC022616.7-201ENST00000525383 220 ntBASIC15.03■□□□□ -0
CDC42P60953 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CDC42P60953 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDC42P60953 TNRC18P2-201ENST00000417666 2714 ntBASIC15.03■□□□□ -0
CDC42P60953 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CDC42P60953 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.03■□□□□ -0
CDC42P60953 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDC42P60953 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDC42P60953 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDC42P60953 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 NSUN5P1-202ENST00000421140 1535 ntBASIC15.02■□□□□ -0
CDC42P60953 NSUN5P2-203ENST00000457352 1529 ntBASIC15.02■□□□□ -0
CDC42P60953 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.02■□□□□ -0
CDC42P60953 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.02■□□□□ -0
CDC42P60953 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 SBF1P1-201ENST00000444527 5631 ntBASIC15.02■□□□□ -0
CDC42P60953 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.02■□□□□ -0
CDC42P60953 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.02■□□□□ -0
CDC42P60953 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.02■□□□□ -0
CDC42P60953 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDC42P60953 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDC42P60953 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.02■□□□□ -0
CDC42P60953 ABCD1P5-201ENST00000445663 754 ntBASIC15.02■□□□□ -0
CDC42P60953 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC42P60953 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
CDC42P60953 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDC42P60953 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.02■□□□□ -0
CDC42P60953 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.02■□□□□ -0
CDC42P60953 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.02■□□□□ -0
CDC42P60953 AC020765.3-201ENST00000613051 740 ntBASIC15.02■□□□□ -0
CDC42P60953 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CDC42P60953 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
CDC42P60953 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC42P60953 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.02□□□□□ -0.01
CDC42P60953 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC42P60953 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDC42P60953 AC016027.1-202ENST00000607927 1699 ntBASIC15.02□□□□□ -0.01
CDC42P60953 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC42P60953 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC42P60953 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.02□□□□□ -0.01
CDC42P60953 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDC42P60953 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDC42P60953 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC42P60953 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms