Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
ACTBP60709 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.14□□□□□ -0.15
ACTBP60709 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.14□□□□□ -0.15
ACTBP60709 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.14□□□□□ -0.15
ACTBP60709 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.14□□□□□ -0.15
ACTBP60709 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.14□□□□□ -0.15
ACTBP60709 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 AL512652.2-201ENST00000625156 1716 ntBASIC14.14□□□□□ -0.15
ACTBP60709 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 NSUN5P1-202ENST00000421140 1535 ntBASIC14.14□□□□□ -0.15
ACTBP60709 NSUN5P2-203ENST00000457352 1529 ntBASIC14.14□□□□□ -0.15
ACTBP60709 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 PCGF3-213ENST00000620529 1899 ntBASIC14.14□□□□□ -0.15
ACTBP60709 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.14□□□□□ -0.15
ACTBP60709 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 SBF1P1-201ENST00000444527 5631 ntBASIC14.13□□□□□ -0.15
ACTBP60709 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.13□□□□□ -0.15
ACTBP60709 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 AC069224.1-201ENST00000566372 1715 ntBASIC14.13□□□□□ -0.15
ACTBP60709 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ACTBP60709 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
ACTBP60709 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.13□□□□□ -0.15
ACTBP60709 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.13□□□□□ -0.15
ACTBP60709 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.13□□□□□ -0.15
ACTBP60709 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.13□□□□□ -0.15
ACTBP60709 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.13□□□□□ -0.15
ACTBP60709 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTBP60709 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTBP60709 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.12□□□□□ -0.15
ACTBP60709 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.12□□□□□ -0.15
ACTBP60709 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ACTBP60709 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms