Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CMC4P56277 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 AL592424.1-201ENST00000563624 1536 ntBASIC12.18□□□□□ -0.46
CMC4P56277 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CMC4P56277 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 AL353705.2-201ENST00000428243 662 ntBASIC12.18□□□□□ -0.46
CMC4P56277 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.18□□□□□ -0.46
CMC4P56277 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.18□□□□□ -0.46
CMC4P56277 AC067863.1-201ENST00000494933 530 ntBASIC12.18□□□□□ -0.46
CMC4P56277 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 RNA5SP410-201ENST00000516285 106 ntBASIC12.18□□□□□ -0.46
CMC4P56277 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.18□□□□□ -0.46
CMC4P56277 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.18□□□□□ -0.46
CMC4P56277 AL512356.2-201ENST00000546955 174 ntBASIC12.18□□□□□ -0.46
CMC4P56277 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 AC004449.1-201ENST00000564240 433 ntBASIC12.18□□□□□ -0.46
CMC4P56277 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.18□□□□□ -0.46
CMC4P56277 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.18□□□□□ -0.46
CMC4P56277 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.18□□□□□ -0.46
CMC4P56277 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 AP001059.3-201ENST00000619053 235 ntBASIC12.18□□□□□ -0.46
CMC4P56277 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
CMC4P56277 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CMC4P56277 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CMC4P56277 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CMC4P56277 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CMC4P56277 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CMC4P56277 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.17□□□□□ -0.46
CMC4P56277 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CMC4P56277 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CMC4P56277 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CMC4P56277 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.17□□□□□ -0.46
CMC4P56277 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.17□□□□□ -0.46
CMC4P56277 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.17□□□□□ -0.46
CMC4P56277 RBPMS2P1-201ENST00000437762 623 ntBASIC12.17□□□□□ -0.46
CMC4P56277 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.17□□□□□ -0.46
CMC4P56277 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 ALG1L8P-201ENST00000533887 760 ntBASIC12.17□□□□□ -0.46
CMC4P56277 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.17□□□□□ -0.46
CMC4P56277 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CMC4P56277 AL138918.1-201ENST00000568306 659 ntBASIC12.17□□□□□ -0.46
CMC4P56277 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms