Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH12P55289 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH12P55289 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH12P55289 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH12P55289 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH12P55289 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH12P55289 KRT18P27-201ENST00000427733 1299 ntBASIC15.31■□□□□ 0.04
CDH12P55289 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CDH12P55289 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH12P55289 OR7E14P-202ENST00000530490 1290 ntBASIC15.31■□□□□ 0.04
CDH12P55289 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH12P55289 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH12P55289 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH12P55289 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CDH12P55289 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH12P55289 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH12P55289 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 LINC02447-202ENST00000501888 2146 ntBASIC15.31■□□□□ 0.04
CDH12P55289 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH12P55289 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.31■□□□□ 0.04
CDH12P55289 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 AC073621.1-201ENST00000392730 636 ntBASIC15.3■□□□□ 0.04
CDH12P55289 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDH12P55289 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 CDC14C-201ENST00000428251 1719 ntBASIC15.3■□□□□ 0.04
CDH12P55289 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH12P55289 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH12P55289 RNPS1P1-201ENST00000507437 918 ntBASIC15.3■□□□□ 0.04
CDH12P55289 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH12P55289 AC073648.2-201ENST00000510116 352 ntBASIC15.3■□□□□ 0.04
CDH12P55289 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH12P55289 SLC22A20-204ENST00000530038 1673 ntBASIC15.3■□□□□ 0.04
CDH12P55289 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDH12P55289 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH12P55289 AC091167.2-201ENST00000579581 588 ntBASIC15.3■□□□□ 0.04
CDH12P55289 CYP2A7P1-201ENST00000595391 815 ntBASIC15.3■□□□□ 0.04
CDH12P55289 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH12P55289 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CDH12P55289 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDH12P55289 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CDH12P55289 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDH12P55289 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH12P55289 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms