Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.53■□□□□ 0.24
LIMK2P53671 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.53■□□□□ 0.24
LIMK2P53671 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.53■□□□□ 0.24
LIMK2P53671 AC020765.3-201ENST00000613051 740 ntBASIC16.53■□□□□ 0.24
LIMK2P53671 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.53■□□□□ 0.24
LIMK2P53671 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
LIMK2P53671 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LIMK2P53671 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.53■□□□□ 0.24
LIMK2P53671 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.53■□□□□ 0.24
LIMK2P53671 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.52■□□□□ 0.24
LIMK2P53671 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.52■□□□□ 0.24
LIMK2P53671 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.52■□□□□ 0.24
LIMK2P53671 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
LIMK2P53671 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
LIMK2P53671 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.52■□□□□ 0.24
LIMK2P53671 CNN2P11-201ENST00000429351 262 ntBASIC16.52■□□□□ 0.24
LIMK2P53671 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.52■□□□□ 0.24
LIMK2P53671 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LIMK2P53671 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.52■□□□□ 0.24
LIMK2P53671 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
LIMK2P53671 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LIMK2P53671 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
LIMK2P53671 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.52■□□□□ 0.24
LIMK2P53671 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIMK2P53671 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.52■□□□□ 0.24
LIMK2P53671 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LIMK2P53671 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LIMK2P53671 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LIMK2P53671 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LIMK2P53671 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LIMK2P53671 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LIMK2P53671 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LIMK2P53671 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LIMK2P53671 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
LIMK2P53671 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.52■□□□□ 0.23
LIMK2P53671 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
LIMK2P53671 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.51■□□□□ 0.23
LIMK2P53671 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.51■□□□□ 0.23
LIMK2P53671 ACTG1P14-201ENST00000446382 1122 ntBASIC16.51■□□□□ 0.23
LIMK2P53671 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.51■□□□□ 0.23
LIMK2P53671 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LIMK2P53671 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 AL031432.2-201ENST00000566714 459 ntBASIC16.51■□□□□ 0.23
LIMK2P53671 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.51■□□□□ 0.23
LIMK2P53671 AL928711.1-201ENST00000570165 459 ntBASIC16.51■□□□□ 0.23
LIMK2P53671 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.51■□□□□ 0.23
LIMK2P53671 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.51■□□□□ 0.23
LIMK2P53671 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.51■□□□□ 0.23
LIMK2P53671 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 AL355385.1-201ENST00000606123 409 ntBASIC16.51■□□□□ 0.23
LIMK2P53671 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
LIMK2P53671 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms