Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPAP53621 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 AC092053.1-201ENST00000605787 1936 ntBASIC16.92■□□□□ 0.3
COPAP53621 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
COPAP53621 PMS2P4-201ENST00000412466 1052 ntBASIC16.92■□□□□ 0.3
COPAP53621 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 CNN2P2-201ENST00000443536 909 ntBASIC16.92■□□□□ 0.3
COPAP53621 CNN2P3-201ENST00000450201 906 ntBASIC16.92■□□□□ 0.3
COPAP53621 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.92■□□□□ 0.3
COPAP53621 IGHV3-62-201ENST00000520057 340 ntBASIC16.92■□□□□ 0.3
COPAP53621 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.92■□□□□ 0.3
COPAP53621 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 AC069262.1-201ENST00000539058 672 ntBASIC16.92■□□□□ 0.3
COPAP53621 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.92■□□□□ 0.3
COPAP53621 AC051619.7-201ENST00000568314 623 ntBASIC16.92■□□□□ 0.3
COPAP53621 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 AL136317.3-201ENST00000618497 906 ntBASIC16.92■□□□□ 0.3
COPAP53621 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.92■□□□□ 0.3
COPAP53621 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.92■□□□□ 0.3
COPAP53621 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPAP53621 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
COPAP53621 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 KRT8P49-201ENST00000604166 1432 ntBASIC16.91■□□□□ 0.3
COPAP53621 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.91■□□□□ 0.3
COPAP53621 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.91■□□□□ 0.3
COPAP53621 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.91■□□□□ 0.3
COPAP53621 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COPAP53621 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.91■□□□□ 0.3
COPAP53621 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPAP53621 AL513523.2-202ENST00000427283 2040 ntBASIC16.91■□□□□ 0.3
COPAP53621 UXT-AS1-201ENST00000590504 1525 ntBASIC16.91■□□□□ 0.3
COPAP53621 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPAP53621 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPAP53621 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPAP53621 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPAP53621 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPAP53621 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COPAP53621 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPAP53621 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.9■□□□□ 0.3
COPAP53621 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPAP53621 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms