Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
USP11P51784 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
USP11P51784 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.43■□□□□ 0.54
USP11P51784 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
USP11P51784 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
USP11P51784 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
USP11P51784 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.43■□□□□ 0.54
USP11P51784 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
USP11P51784 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
USP11P51784 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
USP11P51784 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.43■□□□□ 0.54
USP11P51784 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.43■□□□□ 0.54
USP11P51784 FAM86GP-201ENST00000448322 971 ntBASIC18.43■□□□□ 0.54
USP11P51784 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.43■□□□□ 0.54
USP11P51784 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.43■□□□□ 0.54
USP11P51784 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
USP11P51784 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USP11P51784 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP11P51784 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
USP11P51784 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.43■□□□□ 0.54
USP11P51784 OR6D1P-203ENST00000641209 4860 ntBASIC18.43■□□□□ 0.54
USP11P51784 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.42■□□□□ 0.54
USP11P51784 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.42■□□□□ 0.54
USP11P51784 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP11P51784 AL662844.4-201ENST00000606367 2838 ntBASIC18.42■□□□□ 0.54
USP11P51784 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
USP11P51784 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USP11P51784 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.42■□□□□ 0.54
USP11P51784 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.42■□□□□ 0.54
USP11P51784 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
USP11P51784 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.42■□□□□ 0.54
USP11P51784 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.42■□□□□ 0.54
USP11P51784 RFPL4AP1-201ENST00000530883 850 ntBASIC18.42■□□□□ 0.54
USP11P51784 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.42■□□□□ 0.54
USP11P51784 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.42■□□□□ 0.54
USP11P51784 AC105021.1-202ENST00000570572 669 ntBASIC18.42■□□□□ 0.54
USP11P51784 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.42■□□□□ 0.54
USP11P51784 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.42■□□□□ 0.54
USP11P51784 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.42■□□□□ 0.54
USP11P51784 AC026979.3-201ENST00000607315 403 ntBASIC18.42■□□□□ 0.54
USP11P51784 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.42■□□□□ 0.54
USP11P51784 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP11P51784 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.42■□□□□ 0.54
USP11P51784 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
USP11P51784 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP11P51784 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.41■□□□□ 0.54
USP11P51784 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.41■□□□□ 0.54
USP11P51784 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.41■□□□□ 0.54
USP11P51784 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP11P51784 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP11P51784 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.41■□□□□ 0.54
USP11P51784 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.41■□□□□ 0.54
USP11P51784 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.41■□□□□ 0.54
USP11P51784 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.41■□□□□ 0.54
USP11P51784 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.41■□□□□ 0.54
USP11P51784 KLF2P3-201ENST00000451977 1087 ntBASIC18.41■□□□□ 0.54
USP11P51784 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms