Protein–RNA interactions for Protein: P49593

PPM1F, Protein phosphatase 1F, humanhuman

Predicted RBP Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1FP49593 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PPM1FP49593 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.13■□□□□ 0.17
PPM1FP49593 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PPM1FP49593 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PPM1FP49593 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PPM1FP49593 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PPM1FP49593 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 AC108860.2-201ENST00000562760 2183 ntBASIC16.12■□□□□ 0.17
PPM1FP49593 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 SPDYE7P-202ENST00000420373 878 ntBASIC16.12■□□□□ 0.17
PPM1FP49593 FAM58DP-201ENST00000428076 619 ntBASIC16.12■□□□□ 0.17
PPM1FP49593 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.12■□□□□ 0.17
PPM1FP49593 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.12■□□□□ 0.17
PPM1FP49593 SLC25A39P2-201ENST00000537614 270 ntBASIC16.12■□□□□ 0.17
PPM1FP49593 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.12■□□□□ 0.17
PPM1FP49593 KRT8P23-201ENST00000560090 1207 ntBASIC16.12■□□□□ 0.17
PPM1FP49593 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.12■□□□□ 0.17
PPM1FP49593 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.12■□□□□ 0.17
PPM1FP49593 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.12■□□□□ 0.17
PPM1FP49593 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PPM1FP49593 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PPM1FP49593 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 TUBB3P1-201ENST00000405796 1332 ntBASIC16.12■□□□□ 0.17
PPM1FP49593 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.12■□□□□ 0.17
PPM1FP49593 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.12■□□□□ 0.17
PPM1FP49593 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PPM1FP49593 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PPM1FP49593 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
PPM1FP49593 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PPM1FP49593 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PPM1FP49593 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PPM1FP49593 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 MIR943-201ENST00000401286 94 ntBASIC16.11■□□□□ 0.17
PPM1FP49593 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.11■□□□□ 0.17
PPM1FP49593 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PPM1FP49593 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.11■□□□□ 0.17
PPM1FP49593 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.11■□□□□ 0.17
PPM1FP49593 FAM8A3P-201ENST00000427218 844 ntBASIC16.11■□□□□ 0.17
PPM1FP49593 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PPM1FP49593 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 AC124947.2-201ENST00000547118 1133 ntBASIC16.11■□□□□ 0.17
PPM1FP49593 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.11■□□□□ 0.17
PPM1FP49593 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.11■□□□□ 0.17
PPM1FP49593 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
PPM1FP49593 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
PPM1FP49593 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PPM1FP49593 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PPM1FP49593 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms