Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 AC243591.1-201ENST00000452967 1364 ntBASIC13□□□□□ -0.33
CDC34P49427 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13□□□□□ -0.33
CDC34P49427 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CDC34P49427 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 LIN28AP1-201ENST00000429574 405 ntBASIC13□□□□□ -0.33
CDC34P49427 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CDC34P49427 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 ATP5G1P1-201ENST00000448724 379 ntBASIC13□□□□□ -0.33
CDC34P49427 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13□□□□□ -0.33
CDC34P49427 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13□□□□□ -0.33
CDC34P49427 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 AC124864.1-201ENST00000623408 392 ntBASIC13□□□□□ -0.33
CDC34P49427 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CDC34P49427 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13□□□□□ -0.33
CDC34P49427 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
CDC34P49427 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 SSR4P1-203ENST00000599569 2260 ntBASIC13□□□□□ -0.33
CDC34P49427 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CDC34P49427 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.99□□□□□ -0.33
CDC34P49427 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.99□□□□□ -0.33
CDC34P49427 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 RN7SL606P-201ENST00000472779 293 ntBASIC12.99□□□□□ -0.33
CDC34P49427 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CDC34P49427 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CDC34P49427 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.99□□□□□ -0.33
CDC34P49427 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 AC016027.1-202ENST00000607927 1699 ntBASIC12.99□□□□□ -0.33
CDC34P49427 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC34P49427 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CDC34P49427 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC34P49427 KRT8P39-201ENST00000396270 1433 ntBASIC12.98□□□□□ -0.33
CDC34P49427 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.98□□□□□ -0.33
CDC34P49427 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC34P49427 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms