Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA4P48058 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIA4P48058 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA4P48058 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRIA4P48058 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA4P48058 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA4P48058 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA4P48058 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
GRIA4P48058 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA4P48058 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GRIA4P48058 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIA4P48058 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GRIA4P48058 PCDHA1-201ENST00000378133 2726 ntBASIC16.77■□□□□ 0.28
GRIA4P48058 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA4P48058 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GRIA4P48058 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIA4P48058 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA4P48058 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIA4P48058 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA4P48058 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA4P48058 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA4P48058 AP001059.3-201ENST00000619053 235 ntBASIC16.77■□□□□ 0.28
GRIA4P48058 AJ011932.1-201ENST00000621707 465 ntBASIC16.77■□□□□ 0.28
GRIA4P48058 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA4P48058 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA4P48058 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA4P48058 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.77■□□□□ 0.27
GRIA4P48058 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA4P48058 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA4P48058 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA4P48058 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GRIA4P48058 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA4P48058 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
GRIA4P48058 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.77■□□□□ 0.27
GRIA4P48058 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA4P48058 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA4P48058 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GRIA4P48058 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 AL512652.2-201ENST00000625156 1716 ntBASIC16.76■□□□□ 0.27
GRIA4P48058 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
GRIA4P48058 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.76■□□□□ 0.27
GRIA4P48058 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.76■□□□□ 0.27
GRIA4P48058 MIR4745-201ENST00000577608 62 ntBASIC16.76■□□□□ 0.27
GRIA4P48058 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GRIA4P48058 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.76■□□□□ 0.27
GRIA4P48058 AL162727.3-201ENST00000635661 2787 ntBASIC16.76■□□□□ 0.27
GRIA4P48058 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA4P48058 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.76■□□□□ 0.27
GRIA4P48058 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA4P48058 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.75■□□□□ 0.27
GRIA4P48058 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms