Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RFC3P40938 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFC3P40938 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.02■□□□□ -0
RFC3P40938 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.02■□□□□ -0
RFC3P40938 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.02■□□□□ -0
RFC3P40938 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.02■□□□□ -0
RFC3P40938 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.02■□□□□ -0
RFC3P40938 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.02■□□□□ -0
RFC3P40938 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.02■□□□□ -0
RFC3P40938 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.02■□□□□ -0
RFC3P40938 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.02■□□□□ -0
RFC3P40938 RARRES2P9-201ENST00000565168 469 ntBASIC15.02■□□□□ -0
RFC3P40938 AC140878.1-201ENST00000565277 250 ntBASIC15.02■□□□□ -0
RFC3P40938 MIR4745-201ENST00000577608 62 ntBASIC15.02■□□□□ -0
RFC3P40938 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.02■□□□□ -0
RFC3P40938 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.02■□□□□ -0
RFC3P40938 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC3P40938 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 AL603756.1-201ENST00000606511 2163 ntBASIC15.02□□□□□ -0.01
RFC3P40938 UBALD1-205ENST00000590891 2641 ntBASIC15.02□□□□□ -0.01
RFC3P40938 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RFC3P40938 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC3P40938 FOXO1B-201ENST00000504678 1527 ntBASIC15.02□□□□□ -0.01
RFC3P40938 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
RFC3P40938 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC3P40938 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 PKD1P5-201ENST00000532415 10291 ntBASIC15.01□□□□□ -0.01
RFC3P40938 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.01□□□□□ -0.01
RFC3P40938 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 BASP1P1-201ENST00000430708 665 ntBASIC15.01□□□□□ -0.01
RFC3P40938 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.01□□□□□ -0.01
RFC3P40938 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 AC069120.2-201ENST00000524091 540 ntBASIC15.01□□□□□ -0.01
RFC3P40938 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.01□□□□□ -0.01
RFC3P40938 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.01□□□□□ -0.01
RFC3P40938 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.01□□□□□ -0.01
RFC3P40938 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RFC3P40938 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFC3P40938 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFC3P40938 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFC3P40938 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.01□□□□□ -0.01
RFC3P40938 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC3P40938 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC3P40938 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15□□□□□ -0.01
RFC3P40938 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 AL512652.2-201ENST00000625156 1716 ntBASIC15□□□□□ -0.01
RFC3P40938 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
RFC3P40938 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFC3P40938 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFC3P40938 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15□□□□□ -0.01
RFC3P40938 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15□□□□□ -0.01
RFC3P40938 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15□□□□□ -0.01
RFC3P40938 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15□□□□□ -0.01
RFC3P40938 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 RNF216P1-203ENST00000404404 2427 ntBASIC15□□□□□ -0.01
RFC3P40938 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
RFC3P40938 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFC3P40938 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15□□□□□ -0.01
RFC3P40938 UGT1A2P-201ENST00000454886 866 ntBASIC15□□□□□ -0.01
RFC3P40938 RNA5SP421-201ENST00000516864 134 ntBASIC15□□□□□ -0.01
RFC3P40938 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms