Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 BASP1P1-201ENST00000430708 665 ntBASIC14.56□□□□□ -0.08
HOXC12P31275 AC055876.3-201ENST00000431496 288 ntBASIC14.56□□□□□ -0.08
HOXC12P31275 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.56□□□□□ -0.08
HOXC12P31275 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.56□□□□□ -0.08
HOXC12P31275 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.56□□□□□ -0.08
HOXC12P31275 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HOXC12P31275 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 AC138649.4-201ENST00000612222 287 ntBASIC14.56□□□□□ -0.08
HOXC12P31275 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HOXC12P31275 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HOXC12P31275 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HOXC12P31275 AC105020.1-201ENST00000435356 2205 ntBASIC14.56□□□□□ -0.08
HOXC12P31275 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC12P31275 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
HOXC12P31275 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.55□□□□□ -0.08
HOXC12P31275 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC12P31275 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC12P31275 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HOXC12P31275 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.55□□□□□ -0.08
HOXC12P31275 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 AC002472.2-201ENST00000442739 958 ntBASIC14.55□□□□□ -0.08
HOXC12P31275 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.55□□□□□ -0.08
HOXC12P31275 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC12P31275 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 AC016027.1-202ENST00000607927 1699 ntBASIC14.55□□□□□ -0.08
HOXC12P31275 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC12P31275 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC12P31275 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC12P31275 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HOXC12P31275 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC12P31275 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXC12P31275 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HOXC12P31275 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC12P31275 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXC12P31275 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC12P31275 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
HOXC12P31275 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms