Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC8P31273 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC8P31273 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC8P31273 AC136604.1-201ENST00000418535 575 ntBASIC17.61■□□□□ 0.41
HOXC8P31273 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.61■□□□□ 0.41
HOXC8P31273 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC8P31273 SNX29P1-201ENST00000548357 1007 ntBASIC17.61■□□□□ 0.41
HOXC8P31273 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC8P31273 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
HOXC8P31273 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 AP001282.1-201ENST00000531301 1499 ntBASIC17.61■□□□□ 0.41
HOXC8P31273 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXC8P31273 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC8P31273 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC8P31273 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HOXC8P31273 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HOXC8P31273 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.6■□□□□ 0.41
HOXC8P31273 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HOXC8P31273 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC8P31273 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HOXC8P31273 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HOXC8P31273 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HOXC8P31273 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.6■□□□□ 0.41
HOXC8P31273 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.6■□□□□ 0.41
HOXC8P31273 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HOXC8P31273 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC8P31273 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HOXC8P31273 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXC8P31273 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC8P31273 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HOXC8P31273 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXC8P31273 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HOXC8P31273 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
HOXC8P31273 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 ANKRD19P-201ENST00000338192 862 ntBASIC17.59■□□□□ 0.41
HOXC8P31273 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HOXC8P31273 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HOXC8P31273 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXC8P31273 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXC8P31273 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.59■□□□□ 0.41
HOXC8P31273 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXC8P31273 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXC8P31273 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.59■□□□□ 0.41
HOXC8P31273 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.59■□□□□ 0.41
HOXC8P31273 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms