Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.96■□□□□ 0.63
CDC27P30260 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC27P30260 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
CDC27P30260 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC27P30260 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC27P30260 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDC27P30260 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CDC27P30260 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC27P30260 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC27P30260 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 MIR1233-2-201ENST00000408138 82 ntBASIC18.95■□□□□ 0.62
CDC27P30260 MIR1233-1-201ENST00000408722 82 ntBASIC18.95■□□□□ 0.62
CDC27P30260 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 AC005237.2-201ENST00000434368 219 ntBASIC18.95■□□□□ 0.62
CDC27P30260 DNAJB3-202ENST00000449667 1266 ntBASIC18.95■□□□□ 0.62
CDC27P30260 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.95■□□□□ 0.62
CDC27P30260 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDC27P30260 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.95■□□□□ 0.62
CDC27P30260 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.95■□□□□ 0.62
CDC27P30260 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC27P30260 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC27P30260 AC027612.4-201ENST00000605371 583 ntBASIC18.95■□□□□ 0.62
CDC27P30260 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CDC27P30260 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDC27P30260 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC27P30260 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC27P30260 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CDC27P30260 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.95■□□□□ 0.62
CDC27P30260 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 AP3S2-216ENST00000617003 1561 ntBASIC18.94■□□□□ 0.62
CDC27P30260 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 AL139384.1-201ENST00000612143 3047 ntBASIC18.94■□□□□ 0.62
CDC27P30260 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.94■□□□□ 0.62
CDC27P30260 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDC27P30260 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 AC254562.1-201ENST00000417586 456 ntBASIC18.94■□□□□ 0.62
CDC27P30260 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC27P30260 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC27P30260 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 MIR4321-201ENST00000592276 80 ntBASIC18.94■□□□□ 0.62
CDC27P30260 AL596442.2-201ENST00000610240 980 ntBASIC18.94■□□□□ 0.62
CDC27P30260 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC27P30260 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDC27P30260 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDC27P30260 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC27P30260 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDC27P30260 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDC27P30260 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC27P30260 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDC27P30260 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDC27P30260 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC27P30260 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDC27P30260 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDC27P30260 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDC27P30260 FAM220BP-201ENST00000377689 816 ntBASIC18.93■□□□□ 0.62
CDC27P30260 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC27P30260 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC27P30260 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.93■□□□□ 0.62
CDC27P30260 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC27P30260 RPS8P6-201ENST00000426177 609 ntBASIC18.93■□□□□ 0.62
CDC27P30260 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CDC27P30260 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC27P30260 AC004835.2-201ENST00000603762 682 ntBASIC18.93■□□□□ 0.62
CDC27P30260 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC27P30260 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms